Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
PAAD rs36055753 chr1:227464748 C/T 3.22E-5 178 15.55 15.43 3.9 KM Plot
PAAD rs36160442 chr16:8739822 C/T 0.000157 178 4.93 15.5 15.6 KM Plot
PAAD rs363411 chr10:119013632 A/G 0.000105 178 40.53 11.77 16.05 KM Plot
PAAD rs367709210 chr1:227431702 CA/C 3.22E-5 178 15.55 15.43 3.9 KM Plot
PAAD rs367864336 chr11:125732632 G/A 0.000114 175 15.87 12.2 4.1 KM Plot
PAAD rs368380515 chr11:125732294 G/A 0.000114 175 15.87 12.2 4.1 KM Plot
PAAD rs369937731 chr2:70499827 CATTT/C 0 178 15.37 17.4 1.03 KM Plot
PAAD rs370191769 chr1:227297927 CTCTT/C 3.2E-5 178 15.53 15.65 3.9 KM Plot
PAAD rs370411410 chr7:102831450 TATC/T 4.77E-10 170 16.28 11.98 4.1 KM Plot
PAAD rs370763511 chr1:16314467 CTG/C 2.03E-6 176 3.43 14 15.62 KM Plot
PAAD rs370788119 chr1:227290669 TA/T 3.2E-5 178 15.53 15.65 3.9 KM Plot
PAAD rs371144525 chr1:227463291 TC/T 3.22E-5 178 15.55 15.43 3.9 KM Plot
PAAD rs371269425 chr7:102588235 T/TA 3.86E-8 174 16.28 12.63 3.43 KM Plot
PAAD rs371764045 chr11:125574236 TAC/T 0.000112 177 16.08 14.18 5.03 KM Plot
PAAD rs372393390 chr7:44332655 GC/G 0 170 15.57 13.47 2.68 KM Plot